National Reference Laboratory for Shiga Toxin-producing Escherichia Coli Nrl Stec

Top Publications

Top Publications Authored or Co-Authored in "National Reference Laboratory for Shiga Toxin-producing Escherichia Coli Nrl Stec"

• Impact of DNA extraction on whole genome sequencing analysis for characterization and relatedness of Shiga toxin-producing Escherichia coli isolates

  Scientific Reports, Volume 10, No. 1, Article 14649, Year 2020, Citations 32
• Validation strategy of a bioinformatics whole genome sequencing workflow for Shiga toxin-producing Escherichia coli using a reference collection extensively characterized with conventional methods

  Microbial Genomics, Volume 7, No. 3, Article 000531, Year 2021, Citations 22
• Towards Real-Time and Affordable Strain-Level Metagenomics-Based Foodborne Outbreak Investigations Using Oxford Nanopore Sequencing Technologies

  Frontiers in Microbiology, Volume 12, Article 738284, Year 2021, Citations 13
• Strain-level metagenomic data analysis of enriched in vitro and in silico spiked food samples: Paving the way towards a culture-free foodborne outbreak investigation using STEC as a case study

  International Journal of Molecular Sciences, Volume 21, No. 16, Article 5688, Year 2020, Citations 12
• A practical method to implement strain-level metagenomics-based foodborne outbreak investigation and source tracking in routine

  Microorganisms, Volume 8, No. 8, Article 1191, Year 2020, Citations 11