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Publication Details
AFRICAN RESEARCH NEXUS
SHINING A SPOTLIGHT ON AFRICAN RESEARCH
agricultural and biological sciences
Transcriptome analysis of Pyrus pyrifolia leaf buds during transition from endodormancy to ecodormancy
Scientia Horticulturae, Volume 147, Year 2012
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Description
We analyzed the transcriptome of Japanese pear (Pyrus pyrifolia Nakai) 'Kousui' leaf buds during the dormancy transitional phases using a 10K cDNA microarray. Leaf buds were collected in October (deep endodormancy) and February (ecodormancy). Over 1000 genes were differentially expressed (P<0.05, ≥2-fold change). Most of these genes are functionally related to chloroplast or plastids, electron transport or energy pathways, response to stimuli or stress, signal transduction or transcription. Of these genes detected in this study, 76 and 22 were highly induced (≥10-fold change) during endodormancy and ecodormancy phases, respectively. Comparison of selected genes between 'Kousui' and the less-dormant Taiwanese pear 'Hengshanli' (TP-85-119) identified two novel transcription factors (NAC and PRR) whose expression varied concomitantly with the dormancy phase changes. Further studies involving the genes uncovered from this microarray analysis is expected to provide new insights into the molecular events underlying their physiological role in plants including dormancy breaking for stable fruit set. © 2012 Elsevier B.V.
Authors & Co-Authors
Nishitani, Chikako
Japan, Tsukuba
Institute of Fruit Tree and Tea Science, Naro
Saito, Takanori
Japan, Tsukuba
Institute of Fruit Tree and Tea Science, Naro
Japan, Tsukuba
University of Tsukuba
Ubi, Benjamin Ewa
Japan, Tsukuba
Institute of Fruit Tree and Tea Science, Naro
Nigeria, Abakaliki
Ebonyi State University
Shimizu, Tokurou
Japan, Tsukuba
Institute of Fruit Tree and Tea Science, Naro
Itai, Akihiro
Japan, Tottori
Tottori University
Saito, Toshihiro
Japan, Tsukuba
Institute of Fruit Tree and Tea Science, Naro
Yamamoto, Toshiya
Japan, Tsukuba
Institute of Fruit Tree and Tea Science, Naro
Moriguchi, Takaya
Japan, Tsukuba
Institute of Fruit Tree and Tea Science, Naro
Japan, Tsukuba
University of Tsukuba
Statistics
Citations: 27
Authors: 8
Affiliations: 4
Identifiers
Doi:
10.1016/j.scienta.2012.09.001
ISSN:
03044238
Research Areas
Genetics And Genomics